Similar HOG based on pairwise relations to

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

HOG:E0806372.4a.13a with 1 members (post-gpi attachment to proteins factor)

Eukaryota / Opisthokonta / Metazoa / Eumetazoa / Bilateria / Protostomia / Ecdysozoa /

... /

Panarthropoda / Arthropoda / Mandibulata / Pancrustacea / Hexapoda / Neoptera /

Endopterygota /

Completeness score: 0.02

‹

This HOG has 22 similar HOGs:

Loading, please wait...

Rank	HOG ID	Shared orthologs	HOG size	Description
1	HOG:E0806372.4a.16a.12a	14	145	post-gpi attachment to proteins factor
2	HOG:E0806372.4a	11	295	post-gpi attachment to proteins factor
3	HOG:E0806372.3a	11	221	post-gpi attachment to proteins factor
4	HOG:E0806372.4a.13b	7	55	post-gpi attachment to proteins factor
5	HOG:E0812550.1a	2	2	post-GPI attachment to proteins
6	HOG:E0806372.4a.9b	2	2	post-gpi attachment to proteins factor
7	HOG:E0806372.4a.16a	2	149	post-gpi attachment to proteins factor
8	HOG:E0806372.2a.2b.10b.5b	2	37	post-gpi attachment to proteins factor
9	HOG:E0806372.2a.1b	2	2	post-gpi attachment to proteins factor
10	HOG:E0812550	1	6	post-GPI attachment to proteins
11	HOG:E0806372.4a.16b	1	1	post-gpi attachment to proteins factor
12	HOG:E0806372.4a.15a	1	1	post-gpi attachment to proteins factor
13	HOG:E0806372.4a.13b.11b	1	1	post-gpi attachment to proteins factor
14	HOG:E0806372.4a.10a	1	1	post-gpi attachment to proteins factor
15	HOG:E0806372.3a.6a	1	1	post-gpi attachment to proteins factor
16	HOG:E0806372.3a.3b	1	2	post-gpi attachment to proteins factor
17	HOG:E0806372.2a.2b.10c.11c.20a	1	5	post-gpi attachment to proteins factor
18	HOG:E0806372.2a.2b.10c.11c.16b	1	1	post-gpi attachment to proteins factor
19	HOG:E0806372.2a.2b.10c	1	135	post-gpi attachment to proteins factor
20	HOG:E0301412.1b	1	3	Post-GPI attachment to proteins factor
21	HOG:E0244874	1	2	Post-GPI attachment to proteins factor
22	HOG:E0240074.1e	1	1	Post-GPI attachment to proteins factor

Showing 1 to 22 of 22 rows rows per page